BioPilot - Cell Therapy Research Engine

Manage your entire pipeline from discovery to clinical translation

Built by cell therapy scientists
Security-first architecture
Part 11-aligned workflows

Process is Product. Prove It.

Replace fragmented spreadsheets, generic ELNs, and disconnected analysis tools with a single, unified research engine. BioPilot connects experiment design, inventory, bioreactor monitoring, and analytics across your in vitro and in vivo programs.

  • Standardized ontologies for rigorous traceability
  • Native flow cytometry gating & scRNA-seq pipelines
  • Built-in Bayesian optimization for rapid iteration
Book a Demo Explore Platform
30–50% R&D Time Reclaimed
0% Manual Transcription Risk
97% Faster CMC Drafting
50% Faster Tech Transfer

Explore the modules that power BioPilot

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Electronic Lab Notebook

9:15 AM Jan 19

Passage 12 → Differentiation Start

Seeded 2.5×10⁶ cells/well in Stage 1 media. Protocol v3.2 initiated.

Signed
2:30 PM Jan 18

Day 3 Media Change

Replaced 80% media with fresh Stage 1 + 10ng/mL Activin A.

Signed
10:00 AM Jan 17

Confluence Check

~85% confluence observed. Proceeding to passage tomorrow.

Draft

Entries link directly to experiments, samples, and data. Protocol versioning with full audit trails.

Cell Bank Management

MCB
iPSC-WTC11-MCB-001
48/50 vials
WCB-01
WCB-003
22/30
WCB-02
WCB-004
15/15
WCB-03
WCB-005
8/10

MCB/WCB hierarchy with lot tracking. QC status workflows and expiry alerts built in.

Material Tracing

MCB P8 · iPSC WCB-01 P12 · Released WCB-02 P12 · Frozen ❄ EXP-047 Expansion EXP-051 Expansion DIFF-012 β-like cells IN VIVO Study-003 QC ✓
5 passages tracked 14 linked records

From master cell bank to in vivo study—every split, passage, and QC check automatically traced.

LIMS Core

Item Lot Expires QC
Activin A ACT-2501 Mar 2027 Pass
Y-27632 ROK-2412 Jun 2027 Pass
bFGF FGF-2502 Aug 2027 Hold
Item Lot Expires QC
mTeSR+ MT-2501 Apr 2027 Pass
RPMI + B27 RP-2412 May 2027 Pass
CDM3 CD-2501 Mar 2027 Test
Equipment ID Cal Due Status
Biostat B BR-001 Jul 2027 Ready
Cytoflex FC-002 Apr 2027 Maint
Incubator INC-05 Jun 2027 Ready

Reagent and media lot tracking. Equipment scheduling. Barcoded locations with QC status.

Instrument Booking

Today · Core Facility Available
8A 10A 12P 2P 4P 6P
CytoFlex Booked
CytoFlex Cell Counter Bench A

Reserve instruments in seconds. Drag to block time, avoid conflicts, and keep bookings tied to the right study.

FACS Analysis

FSC-A → SSC-A → Q2 Q1 Q3 Q4
0%
Gated
0
Events
0%
Viability

Interactive gating workspace. Population stats linked directly to experiment CQAs.

scRNA-seq Pipeline

cloud_upload Drop FASTQ files here
Aligning reads...
OCT4
NANOG
SOX2
iPSC
DE
PGT
PP
EP
β-like

End-to-end single-cell analysis. Publication-ready visualizations without external licenses.

Bayesian Optimization

Run 0 / 5 Exploring space
Process 1 Process 2 Yield
Suggested next experiment Pred. —
DO—
Temp—
RPM—
Compound—
Model confidence —

AI-guided optimization. Finds the best conditions for your experiments with fewer trials.

Protocol Builder

D0
UD00 mTeSR+
D3
DE03 RPMI+B27
D7
PE02 +KGF
D14
BC06 CDM3

Stage-gated differentiation protocols with built-in phase transitions and scheduling.

In Vivo Coordination

PROTO-2024-017
GLP IACUC ✓
Housing D-7 Engraft D0 Tx Start D7 Monitor D14 Endpoint D28
Tx Treatment n=5
Weight —
Score —
Feed —
Ctrl Vehicle n=5
Weight —
Score —
Feed —
Body Weight (g)
Tx Ctrl
18 22 26

Cohort orchestration. Feeding & weight logs. Condition scoring. Compliance tracking from housing to endpoint.

Built for Cell Therapy Workflows

Pre-Configured for Your Cell Types

iPSC. MSC. CAR-T. CAR-NK. Gene-modified. The stages, processes, and markers you actually use—not months of custom ontology work.

End the Tool-Switching

Experiment design → inventory → data collection → analysis → lineage. One platform. One login. One source of truth.

Accessible Pricing

Pharmaceutical-grade traceability without enterprise contracts. Early access available now.

IND-Ready by Design

Labs lose IND applications not from bad science, but from fragmented records. BioPilot builds audit trails, e-signatures, and compliance evidence during the workflow — not as a retroactive cleanup sprint before submission.